species:   Clros
pid:       PID2244
parent:    cro-mir-40
paralog:   
locus:     CADEHS020000345.2:350320-350379
matures:   ['UCGAAUCCGUACUGAUGA', 'GUCAGGCGGUCGGGU']
srr:       ERR5960111
genome:    /Users/jax/+Genomes/Fungal_genomes/Clros.GCA_902827195.2_C_rosea_IK726_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5960111.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Piombo2021-ru.ERR5960111.cram CADEHS020000345.2:350320-350379

8 out of bounds
12 alignments
2 proper strand
2 stranded perfect matches

***************                         ********************
GUCAGGCGGUCGGGUAGCGACAGGACAUCCGUCCAUCGUUGUUCGAAUCCGUACUGAUGA
((((((((((((((((((((..((((....)))).)))))))))))..)))).)))))..
------------------------------------------UCGAAUCCGUACUGAUGA l=18 a=2 c
GUCAGGCGGUCGGGU--------------------------------------------- l=15 a=0 c*
------------------------------------------UCGAAUCCGUACUGAUGA l=18 a=2 ma
GUCAGGCGGUCGGGU--------------------------------------------- l=15 a=0 ma*

------------------------------------------UCGAAUCCGUACUGAUGA l=18 a=2 (c,ma)

mb-01011
ax-1011001
ku-01
ss-101011011000
fn-101
